Taxonomy: Agrobacterium sp. H13-3

Full Lineage (Corrected)

Domain Bacteria
Phylum Proteobacteria
Class Alphaproteobacteria
Order Rhizobiales
Family Rhizobiaceae
Genus Agrobacterium
Species Agrobacterium tumefaciens
SubSpecies Agrobacterium sp. H13-3

Old Lineage: Help

We processed the genomes included in Metaref with PhyloPhlAn, a pipeline developed for confidently detecting inconsistencies between the microbial taxonomy and phylogeny that can be explained only assuming taxonomic mislabeling. Using the pipeline we were able to detect these inconsistencies and provide more plausible assignments when this was possible at high confidence. The pipeline also refines the assignments by providing species-level placements for taxa previously assigned at genus-level only


External Links:
IMG: Genome Page

ChocoPhlan Gene Report Table

Genome Detail

Number of Genes: 5417
taxonomy levelUnique markers
Agrobacterium tumefaciens (species) 256
Clade object (genome) 472
taxonomy levelcore
Agrobacterium tumefaciens (species)2922
Agrobacterium (genus)139
Rhizobiaceae (family)55