Taxonomy: Escherichia sp. 4_1_40B

Full Lineage (Corrected)

Domain Bacteria
Phylum Proteobacteria
Class Gammaproteobacteria
Order Enterobacteriales
Family Enterobacteriaceae
Genus Escherichia
Species Escherichia coli
SubSpecies Escherichia sp. 4_1_40B

Old Lineage: Help

We processed the genomes included in Metaref with PhyloPhlAn, a pipeline developed for confidently detecting inconsistencies between the microbial taxonomy and phylogeny that can be explained only assuming taxonomic mislabeling. Using the pipeline we were able to detect these inconsistencies and provide more plausible assignments when this was possible at high confidence. The pipeline also refines the assignments by providing species-level placements for taxa previously assigned at genus-level only


External Links:
IMG: Genome Page

ChocoPhlan Gene Report Table

Genome Detail

Number of Genes: 4697
taxonomy levelUnique markers
Clade object (genome) 24
taxonomy levelcore
Escherichia coli (species)626
Escherichia (genus)2674
Enterobacteriaceae (family)33