Taxonomy: Agreia sp. PHSC20C1

Full Lineage (Corrected)

Domain Bacteria
Phylum Actinobacteria
Class Actinobacteria
Order Actinomycetales
Family Microbacteriaceae
Genus Clavibacter
Species Clavibacter michiganensis
SubSpecies Agreia sp. PHSC20C1

Old Lineage: Help

We processed the genomes included in Metaref with PhyloPhlAn, a pipeline developed for confidently detecting inconsistencies between the microbial taxonomy and phylogeny that can be explained only assuming taxonomic mislabeling. Using the pipeline we were able to detect these inconsistencies and provide more plausible assignments when this was possible at high confidence. The pipeline also refines the assignments by providing species-level placements for taxa previously assigned at genus-level only


External Links:
IMG: Genome Page

ChocoPhlan Gene Report Table

Genome Detail

Number of Genes: 2718
taxonomy levelUnique markers
Clade object (genome) 1132
Clavibacter (genus) 1
taxonomy levelcore
Clavibacter (genus)27
Microbacteriaceae (family)37