Taxonomy: Salmonella enterica enterica sv Typhimurium LT2 LT2


Full Lineage (Corrected)

Domain Bacteria
Phylum Proteobacteria
Class Gammaproteobacteria
Order Enterobacteriales
Family Enterobacteriaceae
Genus Salmonella
Species Salmonella enterica
SubSpecies Salmonella enterica enterica sv Typhimurium LT2 LT2

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We processed the genomes included in Metaref with PhyloPhlAn, a pipeline developed for confidently detecting inconsistencies between the microbial taxonomy and phylogeny that can be explained only assuming taxonomic mislabeling. Using the pipeline we were able to detect these inconsistencies and provide more plausible assignments when this was possible at high confidence. The pipeline also refines the assignments by providing species-level placements for taxa previously assigned at genus-level only


d__Bacteria.p__Proteobacteria.c__Gammaproteobacteria.o__Enterobacteriales.f__Enterobacteriaceae.g__Salmonella.s__typhimurium.t__t637000255

External Links:
IMG: Genome Page

Downloads:
ChocoPhlan Gene Report Table


Genome Detail

Number of Genes: 4781
taxonomy levelUnique markers
Salmonella enterica (species) 8
Clade object (genome) 9
Salmonella (genus) 122
taxonomy levelcore
Salmonella enterica (species)133
Salmonella (genus)3451
Enterobacteriaceae (family)54