Gene Family Page

Family IMG ID643041201
Gene TypeProtein
Family TypeCSCORE
Gene Count23
Sequences Fasta file
Gene Table Tab-Delimited file

Associated Clade GenomesScore
Bacteroides xylanisolvens
(Species)
2 / 2 1.0
Bacteroides finegoldii
(Species)
1 / 1 1.0
Bacteroides coprocola
(Species)
1 / 1 1.0
Bacteroides plebeius
(Species)
1 / 1 1.0
Bacteroides cellulosilyticus
(Species)
1 / 1 1.0
Bacteroides fragilis
(Species)
6 / 7 0.5217
Bacteroides ovatus
(Species)
9 / 9 1.0
Gene Description (up to the top 5)Counts
glycyl-tRNA synthetase12
glycyl-tRNA synthetase (EC 6.1.1.14)5
glycine--tRNA ligase5
putative glycyl-tRNA synthetase1

DbDescriptionCounts
KEGG KO:K01880 glycyl-tRNA synthetase [EC:6.1.1.14]23
COG COG0423 Glycyl-tRNA synthetase (class II)23
EC EC:6.1.1.14 Glycine--tRNA ligase.23
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This genome tree highlights the genomes of the query gene family (red dots), as well as the genomes, if any, that have homologs that are not included in the family (cyan dots).

A marker gene family has no homologs outside itself, therefore, no cyan dots would be observed.

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This image is generated using GraPhlAn.

HMP Metagenomic Data


Prevalence
Bar Chart


Log(Relative Abundance, %)


Sister Gene Families


CSCORE 646231805: Bacteroides coprophilus (Species)
CSCORE 642198912: Bacteroides helcogenes (Species)
CSCORE 645276462: Bacteroides fragilis 3_1_12 (SubSpecies)
CSCORE 643155027: Parabacteroides (Genus)
CSCORE 646737947: Prevotella ruminicola (Species)
CSCORE 651556342: Paraprevotella (Genus)
CSCORE 651389350: Dysgonomonas (Genus)
CSCORE 651387661: Dysgonomonas (Genus)
CSCORE 649961717: Odoribacter (Genus)
CSCORE 647316770: Prevotella buccalis (Species)
CSCORE 650291472: Prevotella oralis (Species)
CSCORE 648809400: Prevotella marshii (Species)
CSCORE 649775308: Paludibacter (Genus)
CSCORE 644149951: Prevotella copri (Species)
CSCORE 646145020: Prevotella disiens (Species)
CSCORE 647313657: Prevotella timonensis (Species)
CSCORE 647356216: Prevotella bivia (Species)
CSCORE 651672629: Prevotella pallens (Species)
CSCORE 646032083: Prevotella tannerae (Species)
CSCORE 650372459: Prevotella denticola (Species)
CSCORE 637150735: Porphyromonas gingivalis (Species)
CSCORE 648407128: Prevotella amnii (Species)
CSCORE 646083855: Prevotella bergensis (Species)
CSCORE 650321332: Prevotella oris (Species)
CSCORE 647927054: Prevotella buccae (Species)
CSCORE 645432760: Sphingobacterium (Genus)
CSCORE 651036765: Capnocytophaga canimorsus (Species)
CSCORE 648777680: Prevotella disiens (Species)
CSCORE 650521633: Rikenellaceae (Family)
CSCORE 644962557: Chitinophagaceae (Family)
CSCORE 645627393: Porphyromonas endodontalis (Species)
CSCORE 650259173: Porphyromonas asaccharolytica (Species)
CSCORE 650259173: Porphyromonas asaccharolytica (Species)
CSCORE 644425272: Chryseobacterium (Genus)
CSCORE 644425272: Chryseobacterium (Genus)
CSCORE 643195785: Capnocytophaga (Genus)
CSCORE 649981116: Pedobacter (Genus)
CSCORE 649981116: Pedobacter (Genus)
CSCORE 644936902: Pedobacter (Genus)
CSCORE 644936902: Pedobacter (Genus)
CSCORE 649730723: Leadbetterella (Genus)
CSCORE 649730723: Leadbetterella (Genus)
CSCORE 638073476: Cytophaga (Genus)
CSCORE 638073476: Cytophaga (Genus)
CSCORE 649895118: Cellulophaga (Genus)
CSCORE 650481949: Weeksella (Genus)
CSCORE 638935085: Leeuwenhoekiella (Genus)
CSCORE 644450269: Capnocytophaga gingivalis (Species)
CSCORE 644450269: Capnocytophaga gingivalis (Species)
CSCORE 639720394: Gramella (Genus)
CSCORE 646495287: Spirosoma (Genus)
CSCORE 646325427: Robiginitalea (Genus)
CSCORE 649778506: Riemerella (Genus)
CSCORE 648044268: Croceibacter (Genus)
CSCORE 650221891: Mucilaginibacter (Genus)
CSCORE 639303210: Corynebacterium glutamicum (Species)
CSCORE 637481762: Bdellovibrionaceae (Family)
CSCORE 642667647: Chlorobium limicola (Species)
CSCORE 642682545: Chlorobium phaeobacteroides BS1 (SubSpecies)
CSCORE 642724016: Prosthecochloris (Genus)
CSCORE 650878088: Treponema azotonutricium (Species)
CSCORE 644183563: Catenibacterium (Genus)
CSCORE 646281843: Ruminococcus obeum (Species)
CSCORE 639118748: Psychroflexus (Genus)
CSCORE 646164262: Treponema vincentii (Species)
CSCORE 650532239: Butyrivibrio fibrisolvens (Species)
CSCORE 637768045: Pelodictyon luteolum (Species)
CSCORE 640452423: Chlorobium vibrioformis (Species)
CSCORE 647491478: Corynebacterium ammoniagenes (Species)
CSCORE 644176937: Clostridium asparagiforme (Species)
CSCORE 643193471: Corynebacterium amycolatum (Species)
CSCORE 646848575: Arcanobacterium (Genus)
CSCORE 648110070: Spirochaeta (Genus)
CSCORE 651572550: Paenibacillus sp. HGF7 (SubSpecies)
CSCORE 641037582: Dorea longicatena (Species)
CSCORE 650180882: Solobacterium (Genus)
CSCORE 649787208: Flammeovirgaceae (Family)
CSCORE 641718913: Mycobacterium marinum (Species)
CSCORE 648240243: Corynebacterium pseudotuberculosis (Species)
CSCORE 650840456: Treponema brennaborense (Species)
CSCORE 642853545: Ruminococcus torques ATCC 27756 (SubSpecies)
CSCORE 643116141: Clostridium nexile (Species)
CSCORE 646102831: Corynebacterium urealyticum (Species)
CSCORE 647360427: Bulleidia (Genus)